Monday, April 26, 2010

Forestry Interests Support Broad "Renewable Biomass" Definition

Forest Resources Association Bulletin
26 April 2010
Vol 12 No 5

On April 20, the National Association of Forest Owners submitted a letter to Senators Kerry, Graham, and Lieberman asking that any definition of "renewable biomass" contained in energy- or climate change-related legislation be broad and "consistent across all relevant federal programs, similar to that of the 2008 Farm Bill" and that "biomass definitions not impose restrictions that would foreclose market opportunities or introduce new federal regulation of public and private lands."  FRA is a signatory to the letter, as are the American Forest & Paper Association, the American Loggers Council, the National Association of State Foresters, many other national conservation associations, several leading institutional landowners, and a long list of state forestry and logging associations.  The letter's full text (with the list of signatories) is archived at http://nafoalliance.org/kgl-biomass-letter/.

The purpose of the letter is to counter a pressure campaign from several green organizations to restrict opportunities for sustainably managed forests in federal carbon policy, in line with these organizations' opposition to extraction of value from forests and their preference for basing renewable energy or carbon reduction incentives on wind, solar, geothermal systems, and on dedicated short-cycle biomass crops.  FRA's endorsement of the letter recognizes that its argument is based on the relationship between sustainable forestry and carbon cycling and the principle of fairness; the letter does not make any representation that a federal Renewable Portfolio Standard or carbon regulation or incentive scheme is a good or bad policy, since FRA and many of the other signatories have no position on that policy question.
 

Saturday, April 17, 2010

Slash and Sprawl: U.S. Eastern Forests Resume Decline

Since the 1970s woodlands that had been rebounding started to shrink again

By David Biello
Scientific American
13 April 2010

Trees once covered almost the entire eastern seaboard of the U.S. Vast forests supported a rich ecosystem, including flocks of the extinct passenger pigeon big enough to blot out the sun. But by the 1920s at least half of this forest was gone—a victim of tree-clearing for farming, forestry or fossil-fuel extraction.

Then, the forest rebounded for several decades as once-farmed fields were left fallow. But a new study reveals that since the 1970s eastern forests have begun to diminish again; roughly 3.7 million hectares of forested land—an area larger than the state of Maryland—have been transformed into subdivisions, tree plantations and lunar-esque landscapes resulting from mountaintop removal mining. In fact, the latter activity alone eliminated 420,000 hectares of woodlands in the past two decades.

"Human land use is a primary driver of environmental change," says geographer Mark Drummond of the U.S. Geological Survey (USGS), who collaborated on the study in the April issue of BioScience with USGS Earth observation scientist Thomas Loveland. "The cumulative footprint of human activities on the land surface is causing a significant net decline in forest cover."

Suburban sprawl was the leading cause of the forest's recent retreat in much of the east. The megalopolis that stretches from Boston to Washington, D.C., has grown in extent by 90 percent since 1970, resulting in the cutting of 1.9 million hectares of trees. The southern coastal plain, northeastern highland and the Piedmont—the hilly region between the coastal plains and the Appalachian Mountains stretching from New Jersey into Georgia and Alabama—lost the most forest cover.

That's bad news for the wildlife that had rebounded along with the woods. It also means that the newly lost trees are not incorporating more carbon dioxide—the most common greenhouse gas changing the climate. Since the early 20th century U.S. forests had been soaking up extra CO2, and this timberland was expected to play a role as an "offset" for greenhouse gas emissions from other sources (like the coal-fired power plants burning through the products of mountaintop removal mining) in any legislation to combat climate change, such as the bill currently being written in the U.S. Senate. "Over the past 30 years, the strength of the carbon sink may have decreased by as much as two thirds in some eco-regions of the east," the USGS researchers wrote.

"We need to improve our understanding of how the U.S. landscape is changing as a result of human activities," Drummond says. "The amount of decline in carbon sequestration is still being examined."

The USGS scientists used Landsat satellite data since 1972, combined with field visits, to more precisely estimate forest cover in the 162 million hectares of the eastern U.S. Previous efforts from the Food and Agriculture Organization of the United Nations (FAO) and U.S. Department of Agriculture had found that forested areas in the eastern U.S. were still expanding overall, if only marginally, based on estimates.

Nor is this trend confined to the eastern U.S. Whereas FAO figures note that deforestation may be slowing globally—from 16 million hectares a year in the 1990s to 13 million hectares per year in the 2000s—that trend may have stopped or reversed in the developed world. "The recent declines in eastern forest cover that we are seeing may herald similar trends elsewhere, in other regions or nations," Drummond says. "We see net forest declines in the west and areas of the south-central U.S. caused by land-use change."


http://www.scientificamerican.com/article.cfm?id=us-eastern-forests-resume-decline

Tuesday, April 13, 2010

What Makes Pine Pollen Allergy So Rare?

By Claire Williams
http://cgwilliams.wordpress.com/

Pinus pollen allergy is rare and clinically insignificant despite the fact that pine pollen is so prevalent (1). Many reports from all parts of the worldwide echo this same result, even though every study seems to have a few individuals which are indeed allergic to pine pollen. Biomedical experts have proposed the following hypotheses for this paradox of pine pollen allergy rarity (1):

Hypothesis 1 : The pine pollen grain (44 to 80 microns in diameter) is too large to penetrate the bloodstream via the human respiratory system.

Hypothesis 2: The protein content of pine pollen is too low

Hypothesis 3: The hydrophobic nature of the pollen grain’s outer covering or exine alters contact with its allergen proteins.

The first hypothesis can be discounted – so strike this one. See hypothesis 3 for a more refined version of a similar idea.

The second hypothesis is also not so well-developed. Why? Consider that a pine pollen grain is a mobile male gametophyte, an independent life form, wrapped in a spore wall supplied by its parent tree. As a life form, it has some protein content in its total of four or five cells as does every other pollen grain. Juniperus ashei is a conifer which causes a severe allergy, mountain cedar fever, and its pollen has similar levels of protein.

The third hypothesis is the most plausible but it too needs more explicit development. Oddly, it is true that a pine pollen grain does not burst upon its contact with watery solutions. Try this with a water glass and a hand-held 10X hand lens. Pine pollen has different protein (not more, not less) profiles compared to those conifers which do produce allerge-causing pollen. This hypothesis is a keeper, deserving of better hypotheses and closer studies using genomics and related -omics approaches.

Consider this limited but intriguing support, i.e. many Juniperus species which are more closely related to the offending species Juniperus ashei share its small pollen size and the same exine-bursting tactic. But DNA sequencing of the allergen protein in Juniperus ashei shows that the same sequence in relatives which do not have allergy-causing pollen have important codon changes including a premature stop codon (see citations from earlier blog post). The difference is hypothesized to be molecular, not morphological.

That’s my bet for the pine story too.

(1) Marcos C., FJ Rodriguez, I Luna, V Jato and R. Gonzalez. 2001. Pinus pollen aerobiology and clinical sensitization in northwest Spain. Annals of Allergy, Ashtma and Immunology 87: 39-42. Freeman G.L. 1993. Pine pollen allergy in northern Arizona. Ann. Allergy 70: 491-494. Rowe A. 1939. Pine` pollen allergy. J. Allergy 10: 377-378. 
 

Thursday, April 8, 2010

Good advice

“The forester should work for the good of the forest as an entity, not for the sake of the forest itself, but to ensure that it will remain a permanently productive source of goods and benefits to the owner and to society.”

David M. Smith
The Practice of Silviculture, 1962
 

Tuesday, April 6, 2010

Tree-mendous


Olivia JudsonOlivia Judson on the influence of science and biology on modern life.

prickly pear trees © Michael Zysman | Dreamstime.com 
 The prickly pear cactus in the Galápagos Islands.

The garden outside my window is home to an enormous and beautiful tree. I gave it a hug the other day, but the trunk is so huge I could barely get my arms round a quarter of its girth. For now, the branches are bare of leaves, so you can see its form in all its majesty, a triumph of natural architecture. And if you half-close your eyes and dream a little, you can also see its roots, stretching deep beneath the grass, much as its branches and twigs stretch outwards towards the buildings and upwards towards the sky.

Trees figure in our mythologies and metaphors — the tree of life, the tree of knowledge — and we often imagine them to harbor spirits and sprites. They also figure in a big way in our reality: forests (still) cover about 30 percent of the planet’s land, and may make up as much as 80 percent of Earth’s biomass. That is, if you were to put all the organisms on the planet on a giant set of scales, trees would account for 80 percent of the total.

Better yet, trees harbor plenty of non-imaginary beings. Birds like starlings or blue tits nest in tree holes; others, like magpies and crows, build their nests high in the branches. Chimpanzees sleep in trees. A number of fungi — truffles, anyone? — associate with tree roots. Insects like wasps make houses (galls) in the leaves. And so on.

A giant sequoia tree in California. 
Monica Almeida/The New York Times  
A giant sequoia tree in California.

Some trees — sequoias and eucalypts, for instance — can be prodigiously tall, reaching heights of 90 meters (295 feet) or more. And some are prodigiously old. Plenty of species can live for four, five or six centuries, and some can keep going for several thousand years. The oldest living tree — which is also one of the oldest living beings — is thought to be a bristlecone pine, Pinus longaeva. It is certainly more than 4,600 years old, and by some reckonings, it celebrates its 4,842nd birthday this year. But however you count, when it was a sapling, the great pyramids of Giza had not yet been built.

Yet although trees are familiar to all of us, many aspects of their biology remain enigmatic: because they grow slowly and live for so long, they’ve been hard for us to study in the laboratory. Which is why they are my nomination for Life-form of the Month: April.

Unlike the Life-forms of the Month I’ve nominated so far (dinoflagellates, ciliates and grasses), trees aren’t a natural group. That is, the term “tree” refers to their lifestyle, not their ancestry. To put it another way, beings that we call trees have evolved several times from different ancestors, whereas beings like ciliates, grasses or (for that matter) primates have evolved only once. Palms evolved into trees independently from species like oaks, for example. Moreover, plant species that exist as herbs or shrubs on a continent often evolve into trees when they find themselves on islands. On some of the Galápagos islands, for example, the prickly pear cactus — which is usually low to the ground — has evolved a tree-form. It is tall, with a woody trunk and its leaves high in the air. The island of Socotra, off the coast of Yemen, is home to a species of cucumber that has become a tree.

What, then, is a tree? Precise definitions vary, but most of them mention the words “tall” and “woody,” and add that a tree has a single self-supporting stem (i.e., a trunk) that branches well above the ground. The first trees appeared more than 375 million years ago, in several different plant lineages, in a burst of evolution that some authors have termed “the scramble for the sky.” If you’d been walking through the Earth’s early forests, you might have seen club mosses that were 40 meters (131 feet) tall, as well as giant horsetails. Both types of tree are now extinct. But what’s interesting about them is that they made wood differently from, say, pine trees. Pine trees grow outwards, forming a solid woody cylinder. In contrast, the trunks of tree-horsetails were hollow tubes, like bamboo. Tree-club mosses produced trunks with a hard outer casing, and a softer interior. Meanwhile, tree-ferns evolved a fourth type of woody structure: they grow several stems that are bound together by other tissues.

(Trees, incidentally, have an excellent fossil record: just think of the vast petrified forests of Arizona, or Patagonia, each of which covers more than 37,000 hectares — more than 90,000 acres. The study of tree growth patterns give us insights into past climates. Early scientists, however, were not sure whether petrified trees were living trees that had become stone, or stones that were becoming trees.)

So what forces produce trees, and could any plant, in principle, evolve into one? The answer to the second part of the question is, maybe. Genetic experiments on the botanists’ lab rat — a weedy little plant called Arabidopsis — have shown that you can make it grow wood by turning off a few key genes. If this is true for other plants too, then growing into a tree may be a matter of a few mutations and the right circumstances.

So what circumstances are those? The evolutionary advantages of being a tree include an ability to get light — especially in dense forests, plants compete for light, and the tallest individuals have the most access to direct sunlight. In addition, their longer lifespan gives them many more chances of reproducing. In places like islands, where there are few trees, plants that were previously living as shrubs may find that the tree habit gives them an edge.

But being a tree has challenges, too. Trees are more vulnerable to wind and lightning than shrubs and herbs. And longevity itself creates difficulties. In the course of centuries, situations change: droughts and fires may come and go, soil may erode, water tables may rise and fall. Worse, other organisms — especially enemies — can evolve far faster, because they can go through hundreds of generations during the tree’s life. How can trees avoid succumbing to diseases? Especially as they don’t have an immune system like ours: you can graft tissue from one tree to that of another (think apples and olives) without the kind of rejection that a mammal would experience. Part of the answer may be that many trees have evolved associations with other, fast-evolving organisms, like fungi and ants, that can protect them to some extent.
With all this in mind, I think I’ll go and hug another tree.


Notes:
The estimate that forests cover 30 percent of the planet’s landmasses comes from the Food and Agriculture Organization of the United Nations, 2005 Forestry Report. The Earth’s total biomass, and that proportion made up by trees, is a number that is hard to pin down. I took my estimate from Wikipedia. A higher estimate (90 percent) is given by Petit, R. J. and Hampe, A. 2006. “Some evolutionary consequences of being a tree.” Annual Review of Ecology, Evolution, and Systematics 37: 187-214. However, I was unable to verify the source of their claim. This paper presents an interesting analysis of the pros and cons of the tree lifestyle, as well as several (rather similar) definitions of the word “tree.”

For the heights of the tallest trees, see the Wikipedia entry on trees. For some of the traits that help trees to live for a long time, see Lanner, R. M. 2002. “Why do trees live so long?” Ageing Research Reviews 1: 653-671. Tracking down the age of bristlecone pines is a difficult business. The authority that is usually cited is Schulman, E. 1958. “Bristlecone pine, oldest known living thing.” National Geographic 113: 355-372. However, this paper simply says that the oldest tree so far found is more than 4,600 years old, and that a more precise estimate is not possible. A far more precise age, of 4,842 years, is given on the Gymnosperm Database entry for the species. However, the author’s source for this more precise age is not entirely clear.

For an excellent and clear account of different forms of wood, as well as the importance of petrified forests in reconstructing the plant fossil record, see chapter three of Kenrick, P. and Davis, P. 2004. “Fossil Plants.” Natural History Museum, London. This book also gives the account of early scientists wondering whether petrified trees were once trees, or were stones coming to life (see page 58). These authors also describe the “scramble for the sky” (page 68).

For a wide-ranging account of the evolution of trees in different plant lineages, see Groover, A. T. 2005. “What genes make a tree a tree?” Trends in Plant Sciences 10: 210-214. For trees in lineages extinct and extant, as well as a more detailed discussion of the evolution of wood, see Donoghue, M. J. 2005. “Key innovations, convergence, and success: macroevolutionary lessons from plant phylogeny.” Paleobiology 31 (supplement to issue 2): 77-93.

For the genetics of Arabidopsis and wood, see Melzer, S. et al. 2008. “Flowering-time genes modulate meristem determinacy and growth form in Arabidopsis thaliana.” Nature Genetics 40: 1489-1492.
For wind as a problem for trees, see Ennos, A. R. 1997. “Wind as an ecological factor.” Trends in Ecology and Evolution 12: 108-111. For trees being protected from enemies by other organisms see, for example, Arnold, A. E. et al. 2003. “Fungal endophytes limit pathogen damage in a tropical tree.” Proceedings of the National Academy of Sciences USA 100: 15649-15654 and Heil, M. and McKey, D. 2003. “Protective ant-plant interactions as model systems in ecological and evolutionary research.” Annual Review of Ecology, Evolution, and Systematics 34: 425-453.

Many thanks to Nicholas Mott and Jamie Shreeve for help in tracking down estimates of bristlecone pine ages, to Martin Espindola for suggesting the root-dream, and to Jonathan Swire for insights, comments and suggestions.